Browse of TCMCG016C04753 protein

CDS

Accession Number	TCMCG016C04753
gbkey	CDS
Protein Id	OMO95923.1
Location	join(7364..7447,8229..8287,8561..8744,8913..9057,9836..9987,10481..10633,10709..10816,11076..11187,11580..11723,11814..11851,11944..12036,12188..12271,12895..13044,13175..13285)
Organism	Corchorus capsularis
locus_tag	CCACVL1_05168

Protein

Length	538aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source	AWWV01007550.1
Definition	RNA polymerase III Rpc82, C -terminal [Corchorus capsularis]
Locus_tag	CCACVL1_05168

EGGNOG-MAPPER Annotation

COG_category	K
Description	RNA polymerase III subunit
KEGG_TC	-
KEGG_Module	M00181        [VIEW IN KEGG]
KEGG_Reaction	R00435        [VIEW IN KEGG] R00441        [VIEW IN KEGG] R00442        [VIEW IN KEGG] R00443        [VIEW IN KEGG]
KEGG_rclass	RC02795        [VIEW IN KEGG]
BRITE	br01611        [VIEW IN KEGG] ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K03023        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko00230        [VIEW IN KEGG] ko00240        [VIEW IN KEGG] ko01100        [VIEW IN KEGG] ko03020        [VIEW IN KEGG] ko04623        [VIEW IN KEGG] ko05169        [VIEW IN KEGG] map00230        [VIEW IN KEGG] map00240        [VIEW IN KEGG] map01100        [VIEW IN KEGG] map03020        [VIEW IN KEGG] map04623        [VIEW IN KEGG] map05169        [VIEW IN KEGG]
GOs	GO:0000428        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005666        [VIEW IN EMBL-EBI] GO:0030880        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044451        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0055029        [VIEW IN EMBL-EBI] GO:0061695        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:1902494        [VIEW IN EMBL-EBI] GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTCGGACAAACCCGACCTATGTGATATTGTTACATCGGACAAAACCGCTGATGATAGTGCTGTTAGGCTGAGGGGGCAAAACTTACAAGTTACAACTTCCAACTTTGCAGCAATTGATGAAATCTTGAAAGCGACCAAAAGTAGTTCACTATTTAACAAGGCCGAACTGAAAACCCTCGTATCACCTACCCGCCCCGAATCTTCCCCTCTTTACTTCAGAGGTGCCATAGAAACAAGCCACCGAATACAGCAAAGAATGGTGACTCAGTACGGCATCAAATACGCCGTCCATCTAATCACCACCCACTTCGGCGATCTCGTCGCTAATGTTTGTGAGTGTCTTCTCCGGAGAGGAACGTTAACTCTCCAAGCCTTAGTCAAGTTCACGGAGCTCAGTTCTTCTCAAGTCAAGAACAGCTTGCTTGTCTTGATTCAACACAATTGCGTTCAAGCTTTTCTTCCCGAGCCTGGAGAAGATGTGATTTTAGATGCTACACAAGCAAACTTAATTAAGTTGCTCAATGCTCGTTTTGTTGAACGATGCCCTGCGGCTGAGCCAGTTCTTGCAAAACCAACTGAAGAAGAATCTTCGGCAAGGAAGCGAGGTCCTAAATCTGCAAAGATACTTGAAGAAAATGAAACATTAGAGTACCGTGTCATGGATGCTGCTGCACCTTCTGAAGCATTAAGATTTTTGCTTGTAACACAAACTGAATCTGCTGCTGATGGAGGGTTGGATGAGAGCAACACCTCTAGCTTGAAAGCTGGTGTGAAGCGCAAGAGTGATGCTTTAGAGTCAGAGACAGAATCTGGGGCTGCAGACGAACAAGTACTTCTCTGGCGTGCTAATTTCGAGGAATTTATGCGTCGTCTTAGGCATGAGGCTTGCATTGAAAATCTGAGGGCACGCTTGGATGATGGAGCTGTTATTGTCTTACGTGCAATGCTCGAAGCAACTAGAAGTGCAGAGAAGAAAGTTAAAACAGAGCATTCAGTTCCTTTGTCACTGAATTCAATTTATGAAGAGGTGATAAAGAGTGTAGAAGGTCGGAATATAACTTTTGATCGTGTGAGAGCCTCCCTTGTTCAGTTGAGTTGTCCACCATTTGTAATAGCTATCAATGAGTCATACAGTATTGATTTCAAGAAAATAATTGAACTAGCTCAGAATGATGAGGTGGAATCTGTTGTTTTGAAAAGATACGGACCTGAAGCATATAAAATGTTCCGATTACTGTCAATTACTGGTCGCTTTGTGGAGACTGATAAGATTGCAGATGGTGCATTTATTGAGAAGAAGGACACACCAATGGTTCTTTATAAGCTGTGGAAGGATGATTATTTGCATATGGAGAAATTACAACTTACAGGTACTAGACAATCACATTTCTTGTTGTGGAAAGTGAATAAGAACACCATACGGGAGCATGTACTAGATGAAATGTTCCATGCTGCCTTAAATTTGAACCTTCGATTGGCTTATGAGGTGGAACAAGAAAAGGAGCTTTTGAGTCTTTCACAAGAGAATCGTGATAAACGACTAAGAAAAGTTAAGTTGCTCTCGCAATCACAGATGAAGCTTGATGATGCTATCATGATTTTCCACGACTTTTGA

Protein:   MSDKPDLCDIVTSDKTADDSAVRLRGQNLQVTTSNFAAIDEILKATKSSSLFNKAELKTLVSPTRPESSPLYFRGAIETSHRIQQRMVTQYGIKYAVHLITTHFGDLVANVCECLLRRGTLTLQALVKFTELSSSQVKNSLLVLIQHNCVQAFLPEPGEDVILDATQANLIKLLNARFVERCPAAEPVLAKPTEEESSARKRGPKSAKILEENETLEYRVMDAAAPSEALRFLLVTQTESAADGGLDESNTSSLKAGVKRKSDALESETESGAADEQVLLWRANFEEFMRRLRHEACIENLRARLDDGAVIVLRAMLEATRSAEKKVKTEHSVPLSLNSIYEEVIKSVEGRNITFDRVRASLVQLSCPPFVIAINESYSIDFKKIIELAQNDEVESVVLKRYGPEAYKMFRLLSITGRFVETDKIADGAFIEKKDTPMVLYKLWKDDYLHMEKLQLTGTRQSHFLLWKVNKNTIREHVLDEMFHAALNLNLRLAYEVEQEKELLSLSQENRDKRLRKVKLLSQSQMKLDDAIMIFHDF